Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pfdn1Q9CWM4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pfdn1Q9CWM4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pfdn1Q9CWM4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pfdn1Q9CWM4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pfdn1Q9CWM4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.92■□□□□ 0.46
Pfdn1Q9CWM4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pfdn1Q9CWM4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pfdn1Q9CWM4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pfdn1Q9CWM4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pfdn1Q9CWM4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pfdn1Q9CWM4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pfdn1Q9CWM4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pfdn1Q9CWM4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Gm37136-201ENSMUST00000194368 194 ntBASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pfdn1Q9CWM4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.88■□□□□ 0.45
Pfdn1Q9CWM4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms