Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Gm22238-201ENSMUST00000175222 88 ntBASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Cacnb1Q8R3Z5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cacnb1Q8R3Z5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cacnb1Q8R3Z5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cacnb1Q8R3Z5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cacnb1Q8R3Z5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Cacnb1Q8R3Z5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cacnb1Q8R3Z5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cacnb1Q8R3Z5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cacnb1Q8R3Z5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.65■■□□□ 1.22
Cacnb1Q8R3Z5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cacnb1Q8R3Z5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cacnb1Q8R3Z5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cacnb1Q8R3Z5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Cacnb1Q8R3Z5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cacnb1Q8R3Z5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
Cacnb1Q8R3Z5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cacnb1Q8R3Z5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Cacnb1Q8R3Z5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cacnb1Q8R3Z5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.64■■□□□ 1.21
Cacnb1Q8R3Z5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Cacnb1Q8R3Z5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Cacnb1Q8R3Z5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cacnb1Q8R3Z5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cacnb1Q8R3Z5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacnb1Q8R3Z5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cacnb1Q8R3Z5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Cacnb1Q8R3Z5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacnb1Q8R3Z5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cacnb1Q8R3Z5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.59■■□□□ 1.21
Cacnb1Q8R3Z5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cacnb1Q8R3Z5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cacnb1Q8R3Z5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Gm25007-201ENSMUST00000083808 133 ntBASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cacnb1Q8R3Z5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacnb1Q8R3Z5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms