Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SVIPQ8NHG7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SVIPQ8NHG7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SVIPQ8NHG7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SVIPQ8NHG7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 AC046158.3-201ENST00000624947 2558 ntBASIC14.47□□□□□ -0.09
SVIPQ8NHG7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SVIPQ8NHG7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 BX255925.1-201ENST00000566954 1854 ntBASIC14.46□□□□□ -0.09
SVIPQ8NHG7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SVIPQ8NHG7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
SVIPQ8NHG7 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.46□□□□□ -0.1
SVIPQ8NHG7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SVIPQ8NHG7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SVIPQ8NHG7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms