Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL13A1Q5TAT6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL13A1Q5TAT6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.39■■□□□ 1.82
COL13A1Q5TAT6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC26.39■■□□□ 1.82
COL13A1Q5TAT6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.39■■□□□ 1.82
COL13A1Q5TAT6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
COL13A1Q5TAT6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL13A1Q5TAT6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 AL050303.2-201ENST00000619798 666 ntBASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL13A1Q5TAT6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL13A1Q5TAT6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.37■■□□□ 1.81
COL13A1Q5TAT6 DUSP5P2-201ENST00000426873 1033 ntBASIC26.37■■□□□ 1.81
COL13A1Q5TAT6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.37■■□□□ 1.81
COL13A1Q5TAT6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.37■■□□□ 1.81
COL13A1Q5TAT6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL13A1Q5TAT6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.36■■□□□ 1.81
COL13A1Q5TAT6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL13A1Q5TAT6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL13A1Q5TAT6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 SLC7A5P2-201ENST00000553010 536 ntBASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 AC009102.2-201ENST00000606772 1639 ntBASIC26.34■■□□□ 1.81
COL13A1Q5TAT6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 GCSHP5-201ENST00000443090 522 ntBASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.33■■□□□ 1.81
COL13A1Q5TAT6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.32■■□□□ 1.8
COL13A1Q5TAT6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL13A1Q5TAT6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL13A1Q5TAT6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL13A1Q5TAT6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL13A1Q5TAT6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL13A1Q5TAT6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL13A1Q5TAT6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.28■■□□□ 1.8
COL13A1Q5TAT6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL13A1Q5TAT6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.28■■□□□ 1.8
COL13A1Q5TAT6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 AC133041.1-202ENST00000642053 222 ntBASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 ABCB10P3-201ENST00000561950 2166 ntBASIC26.27■■□□□ 1.8
COL13A1Q5TAT6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms