Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Q3U1D9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Q3U1D9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q3U1D9 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.77■□□□□ 0.44
Q3U1D9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Q3U1D9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Q3U1D9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q3U1D9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q3U1D9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q3U1D9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q3U1D9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Q3U1D9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q3U1D9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q3U1D9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Q3U1D9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Q3U1D9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.76■□□□□ 0.43
Q3U1D9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Q3U1D9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Q3U1D9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q3U1D9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q3U1D9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q3U1D9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Q3U1D9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Q3U1D9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q3U1D9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Q3U1D9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Q3U1D9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q3U1D9 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.75■□□□□ 0.43
Q3U1D9 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.75■□□□□ 0.43
Q3U1D9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Q3U1D9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.74■□□□□ 0.43
Q3U1D9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q3U1D9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Q3U1D9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.74■□□□□ 0.43
Q3U1D9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.74■□□□□ 0.43
Q3U1D9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q3U1D9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q3U1D9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q3U1D9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q3U1D9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Q3U1D9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.73■□□□□ 0.43
Q3U1D9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Q3U1D9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.73■□□□□ 0.43
Q3U1D9 Mir7075-201ENSMUST00000184187 82 ntBASIC17.73■□□□□ 0.43
Q3U1D9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Q3U1D9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q3U1D9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3U1D9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3U1D9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q3U1D9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3U1D9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Q3U1D9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.72■□□□□ 0.43
Q3U1D9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Q3U1D9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3U1D9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q3U1D9 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.71■□□□□ 0.43
Q3U1D9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.71■□□□□ 0.43
Q3U1D9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.71■□□□□ 0.43
Q3U1D9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q3U1D9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q3U1D9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Q3U1D9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q3U1D9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Q3U1D9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.7■□□□□ 0.42
Q3U1D9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.7■□□□□ 0.42
Q3U1D9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Gm6139-201ENSMUST00000079261 882 ntBASIC17.7■□□□□ 0.42
Q3U1D9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Q3U1D9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.7■□□□□ 0.42
Q3U1D9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q3U1D9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Q3U1D9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Q3U1D9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms