Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pkd1l3Q2EG98 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pkd1l3Q2EG98 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pkd1l3Q2EG98 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pkd1l3Q2EG98 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Pkd1l3Q2EG98 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pkd1l3Q2EG98 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pkd1l3Q2EG98 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pkd1l3Q2EG98 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pkd1l3Q2EG98 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pkd1l3Q2EG98 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pkd1l3Q2EG98 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.33■□□□□ 0.53
Pkd1l3Q2EG98 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pkd1l3Q2EG98 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Gm43173-201ENSMUST00000202246 593 ntBASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pkd1l3Q2EG98 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pkd1l3Q2EG98 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkd1l3Q2EG98 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pkd1l3Q2EG98 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pkd1l3Q2EG98 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pkd1l3Q2EG98 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Gm43017-201ENSMUST00000198296 752 ntBASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pkd1l3Q2EG98 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pkd1l3Q2EG98 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pkd1l3Q2EG98 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pkd1l3Q2EG98 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pkd1l3Q2EG98 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pkd1l3Q2EG98 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pkd1l3Q2EG98 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms