Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv9-2A0A0B4J1J4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Etf1-202ENSMUST00000180351 108 ntBASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm7143-201ENSMUST00000222811 859 ntBASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Gm9959-201ENSMUST00000068277 390 ntBASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv9-2A0A0B4J1J4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.04■□□□□ 0.32
Ighv9-2A0A0B4J1J4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms