Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.75■□□□□ 0.59
Trbc1A0A0A6YWV4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbc1A0A0A6YWV4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbc1A0A0A6YWV4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trbc1A0A0A6YWV4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbc1A0A0A6YWV4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trbc1A0A0A6YWV4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbc1A0A0A6YWV4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbc1A0A0A6YWV4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbc1A0A0A6YWV4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbc1A0A0A6YWV4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.69■□□□□ 0.58
Trbc1A0A0A6YWV4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbc1A0A0A6YWV4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbc1A0A0A6YWV4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbc1A0A0A6YWV4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbc1A0A0A6YWV4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbc1A0A0A6YWV4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
Trbc1A0A0A6YWV4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbc1A0A0A6YWV4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbc1A0A0A6YWV4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbc1A0A0A6YWV4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbc1A0A0A6YWV4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbc1A0A0A6YWV4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trbc1A0A0A6YWV4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms