Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-55A0A075B5W6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-55A0A075B5W6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-55A0A075B5W6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-55A0A075B5W6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Rps24-207ENSMUST00000224568 714 ntBASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-55A0A075B5W6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-55A0A075B5W6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Gm45102-201ENSMUST00000207427 857 ntBASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Gm7143-201ENSMUST00000222811 859 ntBASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ighv1-55A0A075B5W6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Gm14117-201ENSMUST00000122417 843 ntBASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-55A0A075B5W6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ighv1-55A0A075B5W6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-55A0A075B5W6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.07■□□□□ 0.16
Ighv1-55A0A075B5W6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms