Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 AC004898.1-201ENST00000451057 766 ntBASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 AP001258.2-201ENST00000529891 490 ntBASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COL4A3BPQ9Y5P4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL4A3BPQ9Y5P4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COL4A3BPQ9Y5P4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
COL4A3BPQ9Y5P4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
COL4A3BPQ9Y5P4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 KRT8P13-201ENST00000463294 1010 ntBASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 AC022447.6-201ENST00000515522 438 ntBASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 AC005730.2-201ENST00000564549 1184 ntBASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 MIR3615-201ENST00000581999 87 ntBASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL4A3BPQ9Y5P4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 AC007663.3-201ENST00000609632 465 ntBASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
COL4A3BPQ9Y5P4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms