Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 KRT8P28-201ENST00000433288 1390 ntBASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CICP12-201ENST00000455801 843 ntBASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 AL136301.1-201ENST00000615830 422 ntBASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.29■□□□□ 0.04
AP4E1Q9UPM8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AC007326.2-201ENST00000624224 7579 ntBASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 HIST2H2BB-201ENST00000449108 381 ntBASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 MIR6074-201ENST00000612054 107 ntBASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 AC012617.1-204ENST00000586340 2305 ntBASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
AP4E1Q9UPM8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.27■□□□□ 0.04
AP4E1Q9UPM8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms