Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 MIR1202-201ENST00000408529 83 ntBASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 TPT1P11-201ENST00000458482 498 ntBASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 MIR4741-201ENST00000579822 90 ntBASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 PRSS30P-206ENST00000641773 873 ntBASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FBXO39Q8N4B4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.77□□□□□ -0.04
FBXO39Q8N4B4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 AL139094.1-201ENST00000405549 1188 ntBASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 RNA5SP486-201ENST00000515961 83 ntBASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 AC055811.4-201ENST00000624039 1754 ntBASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
FBXO39Q8N4B4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 AL354702.1-201ENST00000442006 1960 ntBASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
FBXO39Q8N4B4 KRT8P14-201ENST00000414254 1442 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms