Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC023908.3-201ENST00000564211 3047 ntBASIC14.33□□□□□ -0.11
CUEDC1Q9NWM3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CUEDC1Q9NWM3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CUEDC1Q9NWM3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CUEDC1Q9NWM3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CUEDC1Q9NWM3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CUEDC1Q9NWM3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 KRT8P4-201ENST00000509735 1454 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AL354702.1-201ENST00000442006 1960 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 GCOM2-201ENST00000509133 1104 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AP006547.1-201ENST00000563435 692 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AC010328.2-201ENST00000597698 1111 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AC008687.7-202ENST00000637404 953 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AC139749.1-202ENST00000617529 3139 ntBASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.33□□□□□ -0.12
CUEDC1Q9NWM3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC097359.2-201ENST00000604992 2389 ntBASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 CNN2P10-201ENST00000443067 918 ntBASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 PPY2P-201ENST00000582808 702 ntBASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AP003400.6-201ENST00000624698 740 ntBASIC14.32□□□□□ -0.12
CUEDC1Q9NWM3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms