Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.17□□□□□ -0.94
Rom1P32958 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rom1P32958 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.17□□□□□ -0.94
Rom1P32958 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.16□□□□□ -0.94
Rom1P32958 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Rom1P32958 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.16□□□□□ -0.94
Rom1P32958 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Gm11500-201ENSMUST00000118237 601 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Gm1335-201ENSMUST00000121653 386 ntBASIC9.16□□□□□ -0.94
Rom1P32958 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Gm3329-201ENSMUST00000159873 556 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Gm3890-201ENSMUST00000182416 207 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Gm27437-201ENSMUST00000183429 107 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Gm27682-201ENSMUST00000183930 110 ntBASIC9.16□□□□□ -0.94
Rom1P32958 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Rom1P32958 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.16□□□□□ -0.94
Rom1P32958 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rom1P32958 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rom1P32958 Gm33366-201ENSMUST00000195583 3827 ntBASIC9.15□□□□□ -0.94
Rom1P32958 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.15□□□□□ -0.94
Rom1P32958 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rom1P32958 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.15□□□□□ -0.94
Rom1P32958 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rom1P32958 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.15□□□□□ -0.94
Rom1P32958 Gm7809-201ENSMUST00000153199 742 ntBASIC9.15□□□□□ -0.94
Rom1P32958 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.15□□□□□ -0.94
Rom1P32958 Gm45384-201ENSMUST00000210451 277 ntBASIC9.15□□□□□ -0.94
Rom1P32958 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.15□□□□□ -0.94
Rom1P32958 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rom1P32958 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms