Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 AGGF1P1-201ENST00000509500 2073 ntBASIC15.09■□□□□ 0.01
SLC6A4P31645 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SLC6A4P31645 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SLC6A4P31645 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.09■□□□□ 0.01
SLC6A4P31645 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 AC009779.1-201ENST00000551138 283 ntBASIC15.09■□□□□ 0.01
SLC6A4P31645 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.09■□□□□ 0.01
SLC6A4P31645 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SLC6A4P31645 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
SLC6A4P31645 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.08■□□□□ 0.01
SLC6A4P31645 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 AC126755.1-201ENST00000525846 6405 ntBASIC15.08■□□□□ 0.01
SLC6A4P31645 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
SLC6A4P31645 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SLC6A4P31645 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SLC6A4P31645 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.08■□□□□ 0
SLC6A4P31645 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.08■□□□□ 0
SLC6A4P31645 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.08■□□□□ 0
SLC6A4P31645 CYP46A4P-201ENST00000414953 267 ntBASIC15.08■□□□□ 0
SLC6A4P31645 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 SPTLC1P5-201ENST00000450718 252 ntBASIC15.08■□□□□ 0
SLC6A4P31645 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.08■□□□□ 0
SLC6A4P31645 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 AC125604.1-201ENST00000496255 707 ntBASIC15.08■□□□□ 0
SLC6A4P31645 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.08■□□□□ 0
SLC6A4P31645 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.08■□□□□ 0
SLC6A4P31645 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.08■□□□□ 0
SLC6A4P31645 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.08■□□□□ 0
SLC6A4P31645 AL132994.2-201ENST00000603120 687 ntBASIC15.08■□□□□ 0
SLC6A4P31645 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 AL136295.7-201ENST00000619226 1200 ntBASIC15.08■□□□□ 0
SLC6A4P31645 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.08■□□□□ 0
SLC6A4P31645 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 MYADML-201ENST00000474610 2147 ntBASIC15.08■□□□□ 0
SLC6A4P31645 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
SLC6A4P31645 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A4P31645 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A4P31645 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A4P31645 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms