Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 HMGN1P19-201ENST00000436976 333 ntBASIC12.9□□□□□ -0.34
XRCC2O43543 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
XRCC2O43543 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 FTLP10-202ENST00000505798 471 ntBASIC12.9□□□□□ -0.34
XRCC2O43543 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
XRCC2O43543 AC131206.1-201ENST00000538078 1211 ntBASIC12.9□□□□□ -0.34
XRCC2O43543 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.9□□□□□ -0.34
XRCC2O43543 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.9□□□□□ -0.34
XRCC2O43543 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
XRCC2O43543 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
XRCC2O43543 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
XRCC2O43543 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
XRCC2O43543 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
XRCC2O43543 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
XRCC2O43543 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
XRCC2O43543 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.9□□□□□ -0.35
XRCC2O43543 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AP001267.2-201ENST00000532619 2086 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 MSTO2P-201ENST00000314835 1709 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.89□□□□□ -0.35
XRCC2O43543 POM121L8P-201ENST00000417732 1281 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.89□□□□□ -0.35
XRCC2O43543 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.89□□□□□ -0.35
XRCC2O43543 POM121L9P-203ENST00000441984 1285 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.89□□□□□ -0.35
XRCC2O43543 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.89□□□□□ -0.35
XRCC2O43543 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.89□□□□□ -0.35
XRCC2O43543 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.89□□□□□ -0.35
XRCC2O43543 AC138761.1-201ENST00000584393 385 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AC004466.1-201ENST00000599515 1080 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 AC138696.2-201ENST00000607376 223 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AC025048.6-201ENST00000634326 1161 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.89□□□□□ -0.35
XRCC2O43543 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 AC010327.5-201ENST00000586923 3061 ntBASIC12.89□□□□□ -0.35
XRCC2O43543 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
XRCC2O43543 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.89□□□□□ -0.35
XRCC2O43543 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
XRCC2O43543 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
XRCC2O43543 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms