Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 AC092580.3-201ENST00000430932 139 ntBASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 AL731571.1-201ENST00000617058 5428 ntBASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KLHL4Q9C0H6 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AL035456.1-201ENST00000456064 1369 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AC236430.1-201ENST00000402231 743 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AC136604.1-201ENST00000418535 575 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 UGT1A2P-201ENST00000454886 866 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 SPDYE12P-201ENST00000618416 771 ntBASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KLHL4Q9C0H6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KLHL4Q9C0H6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms