Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC092757.1-201ENST00000467293 467 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC006499.5-201ENST00000505037 514 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC093810.1-201ENST00000505511 577 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 LDHAL6DP-201ENST00000513668 693 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PENK-208ENST00000523051 772 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MRPL45P2-203ENST00000573318 473 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC011712.1-201ENST00000588959 234 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MFSD11-216ENST00000590393 1141 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC107214.2-201ENST00000608204 634 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL592295.2-201ENST00000612578 206 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MIR6863-201ENST00000636112 90 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL138921.3-201ENST00000636357 992 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 NSRP1P1-201ENST00000444067 1693 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 FCGR2B-202ENST00000358671 2115 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC9B1P1-201ENST00000331172 1337 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC9B1P3-201ENST00000452667 1334 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 FKBP4P1-201ENST00000507284 1347 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RBP7-201ENST00000294435 636 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AKR1C7P-201ENST00000305623 895 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 Y_RNA.166-201ENST00000363730 102 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SNORD42.2-201ENST00000365570 69 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 BORCS7-202ENST00000369883 838 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HLA-G-202ENST00000376815 851 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HLA-G-203ENST00000376818 1127 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CAPNS1P1-201ENST00000401029 633 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF90P2-204ENST00000419323 1075 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNRF2P3-201ENST00000424200 374 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 CNN2P6-201ENST00000439038 900 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SOX5-204ENST00000441133 638 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 MTND3P1-201ENST00000441336 220 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AC120036.1-201ENST00000479243 654 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 AP002884.1-201ENST00000479691 655 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 RPL5P29-201ENST00000482972 894 ntBASIC9.59□□□□□ -0.87
KRTAP3-3Q9BYR6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms