Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.88□□□□□ -0.67
Sox17Q61473 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox17Q61473 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm9794-201ENSMUST00000202370 423 ntBASIC10.88□□□□□ -0.67
Sox17Q61473 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.88□□□□□ -0.67
Sox17Q61473 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox17Q61473 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.88□□□□□ -0.67
Sox17Q61473 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox17Q61473 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox17Q61473 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.87□□□□□ -0.67
Sox17Q61473 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Sox17Q61473 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox17Q61473 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox17Q61473 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox17Q61473 Gm16379-201ENSMUST00000161469 348 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox17Q61473 Gm8762-201ENSMUST00000193486 339 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox17Q61473 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox17Q61473 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox17Q61473 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
Sox17Q61473 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.87□□□□□ -0.67
Sox17Q61473 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sox17Q61473 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox17Q61473 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.86□□□□□ -0.67
Sox17Q61473 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.86□□□□□ -0.67
Sox17Q61473 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.86□□□□□ -0.67
Sox17Q61473 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Sox17Q61473 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sox17Q61473 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms