Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 WASH3P-207ENST00000560956 1394 ntBASIC10.49□□□□□ -0.73
CKS1BP61024 FO538757.1-201ENST00000623083 1397 ntBASIC10.49□□□□□ -0.73
CKS1BP61024 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS1BP61024 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS1BP61024 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.49□□□□□ -0.73
CKS1BP61024 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CKS1BP61024 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.49□□□□□ -0.73
CKS1BP61024 PCDHB18P-202ENST00000526308 3197 ntBASIC10.49□□□□□ -0.73
CKS1BP61024 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CKS1BP61024 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 BX537318.2-201ENST00000624893 4162 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 SUPT20HL1-201ENST00000436466 2618 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
CKS1BP61024 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.48□□□□□ -0.73
CKS1BP61024 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 RPS8P6-201ENST00000426177 609 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 AC079781.3-201ENST00000449110 356 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.48□□□□□ -0.73
CKS1BP61024 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 FAM86C2P-203ENST00000528684 1004 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 RN7SL510P-201ENST00000581311 263 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.48□□□□□ -0.73
CKS1BP61024 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 AC064836.3-201ENST00000607928 673 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
CKS1BP61024 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 ZBED1P1-201ENST00000502364 1930 ntBASIC10.48□□□□□ -0.73
CKS1BP61024 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CKS1BP61024 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.48□□□□□ -0.73
CKS1BP61024 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.48□□□□□ -0.73
CKS1BP61024 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms