Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 AC079781.5-202ENST00000641784 3743 ntBASIC13.17□□□□□ -0.3
NKX6-1P78426 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.17□□□□□ -0.3
NKX6-1P78426 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 HOMER2P2-201ENST00000451621 847 ntBASIC13.17□□□□□ -0.3
NKX6-1P78426 UPF3AP2-201ENST00000457924 1132 ntBASIC13.17□□□□□ -0.3
NKX6-1P78426 AC091804.1-201ENST00000486888 567 ntBASIC13.17□□□□□ -0.3
NKX6-1P78426 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 AC016629.1-201ENST00000596579 586 ntBASIC13.17□□□□□ -0.3
NKX6-1P78426 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 AC007292.2-201ENST00000593524 1812 ntBASIC13.17□□□□□ -0.3
NKX6-1P78426 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
NKX6-1P78426 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX6-1P78426 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX6-1P78426 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX6-1P78426 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 KRT8P14-201ENST00000414254 1442 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-1P78426 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-1P78426 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX6-1P78426 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AP006547.1-201ENST00000563435 692 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AC005695.3-201ENST00000614522 232 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 AC132938.4-201ENST00000623835 848 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NKX6-1P78426 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX6-1P78426 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX6-1P78426 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 AC148477.4-201ENST00000613430 1793 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 C18orf15-201ENST00000623680 2534 ntBASIC13.16□□□□□ -0.3
NKX6-1P78426 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
NKX6-1P78426 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms