Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Proscos-202ENSMUST00000178990 666 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Mir7654-201ENSMUST00000185082 70 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Gm6439-201ENSMUST00000199849 862 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Gm4768-201ENSMUST00000206199 686 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm5781-201ENSMUST00000219792 443 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.74□□□□□ -0.69
Nedd8P29595 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nedd8P29595 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nedd8P29595 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.73□□□□□ -0.69
Nedd8P29595 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nedd8P29595 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nedd8P29595 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nedd8P29595 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Gm12928-201ENSMUST00000117115 573 ntBASIC10.73□□□□□ -0.69
Nedd8P29595 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.73□□□□□ -0.69
Nedd8P29595 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.73□□□□□ -0.69
Nedd8P29595 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.73□□□□□ -0.69
Nedd8P29595 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nedd8P29595 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.73□□□□□ -0.69
Nedd8P29595 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.73□□□□□ -0.69
Nedd8P29595 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.73□□□□□ -0.69
Nedd8P29595 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nedd8P29595 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nedd8P29595 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nedd8P29595 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nedd8P29595 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Nedd8P29595 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Nedd8P29595 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Nedd8P29595 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nedd8P29595 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms