Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
O00370 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
O00370 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
O00370 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
O00370 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 OR8S1-201ENST00000310194 1080 ntBASIC15.83■□□□□ 0.12
O00370 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
O00370 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.83■□□□□ 0.12
O00370 GCOM2-201ENST00000509133 1104 ntBASIC15.83■□□□□ 0.12
O00370 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.83■□□□□ 0.12
O00370 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.83■□□□□ 0.12
O00370 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 C2orf69P2-201ENST00000562032 1123 ntBASIC15.83■□□□□ 0.12
O00370 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 AC073413.1-201ENST00000603927 732 ntBASIC15.83■□□□□ 0.12
O00370 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
O00370 AHCYP2-201ENST00000430630 1300 ntBASIC15.83■□□□□ 0.12
O00370 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.83■□□□□ 0.12
O00370 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
O00370 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.83■□□□□ 0.12
O00370 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
O00370 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
O00370 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.83■□□□□ 0.12
O00370 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.82■□□□□ 0.12
O00370 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
O00370 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
O00370 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
O00370 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
O00370 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
O00370 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
O00370 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
O00370 AC004945.1-201ENST00000416738 983 ntBASIC15.82■□□□□ 0.12
O00370 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 COX5BP1-201ENST00000507622 393 ntBASIC15.82■□□□□ 0.12
O00370 IGHV3-71-201ENST00000523324 359 ntBASIC15.82■□□□□ 0.12
O00370 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.82■□□□□ 0.12
O00370 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.82■□□□□ 0.12
O00370 RN7SL713P-201ENST00000582127 302 ntBASIC15.82■□□□□ 0.12
O00370 MIR4259-201ENST00000584466 101 ntBASIC15.82■□□□□ 0.12
O00370 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.82■□□□□ 0.12
O00370 AC008687.7-202ENST00000637404 953 ntBASIC15.82■□□□□ 0.12
O00370 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
O00370 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.82■□□□□ 0.12
O00370 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
O00370 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
O00370 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.82■□□□□ 0.12
O00370 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
O00370 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms