Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MBD3L3A6NE82 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MBD3L3A6NE82 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 RNA5SP359-201ENST00000364838 113 ntBASIC12.89□□□□□ -0.35
MBD3L3A6NE82 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 AC026320.2-201ENST00000434379 478 ntBASIC12.89□□□□□ -0.35
MBD3L3A6NE82 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MBD3L3A6NE82 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC026316.1-201ENST00000398900 414 ntBASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC103691.2-201ENST00000618824 433 ntBASIC12.88□□□□□ -0.35
MBD3L3A6NE82 AC051619.9-201ENST00000623237 597 ntBASIC12.88□□□□□ -0.35
MBD3L3A6NE82 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms