Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm11509-201ENSMUST00000117358 325 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 B9d1os-201ENSMUST00000137010 674 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm18734-201ENSMUST00000172937 808 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm8343-201ENSMUST00000182705 994 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc2Q6PDG5 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Gm12566-201ENSMUST00000121479 359 ntBASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Gm4310-201ENSMUST00000177847 889 ntBASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Mir6979-201ENSMUST00000183927 56 ntBASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc2Q6PDG5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Smarcc2Q6PDG5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Smarcc2Q6PDG5 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm12196-201ENSMUST00000120954 262 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm25881-201ENSMUST00000157783 103 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Gm3332-201ENSMUST00000189337 928 ntBASIC13.64□□□□□ -0.23
Smarcc2Q6PDG5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms