Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF20Q5VTR2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RNF20Q5VTR2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF20Q5VTR2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AP000593.2-201ENST00000542775 1433 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AC092933.1-201ENST00000393644 945 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 BCRP2-202ENST00000447763 634 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 BCRP6-201ENST00000510112 632 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 BCRP7-201ENST00000511549 544 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 RNA5SP486-201ENST00000515961 83 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AP005018.1-201ENST00000525475 301 ntBASIC17.74■□□□□ 0.43
RNF20Q5VTR2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.74■□□□□ 0.43
RNF20Q5VTR2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 MYADML-201ENST00000474610 2147 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ALG3P1-201ENST00000508806 1114 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 AC132938.2-201ENST00000579188 680 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 BTNL10-201ENST00000595971 695 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 BX088702.1-201ENST00000610784 235 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 AL591163.1-201ENST00000641757 987 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 AC020910.5-201ENST00000623668 1865 ntBASIC17.73■□□□□ 0.43
RNF20Q5VTR2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RNF20Q5VTR2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms