Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHMP24386 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHMP24386 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CHMP24386 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CHMP24386 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHMP24386 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CHMP24386 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 AL138799.1-201ENST00000448213 1675 ntBASIC13.95□□□□□ -0.18
CHMP24386 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 U91328.1-201ENST00000437528 223 ntBASIC13.95□□□□□ -0.18
CHMP24386 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 PTP4A1P2-201ENST00000546033 454 ntBASIC13.95□□□□□ -0.18
CHMP24386 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.95□□□□□ -0.18
CHMP24386 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CHMP24386 AL359881.2-201ENST00000602973 570 ntBASIC13.95□□□□□ -0.18
CHMP24386 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.95□□□□□ -0.18
CHMP24386 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.95□□□□□ -0.18
CHMP24386 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.95□□□□□ -0.18
CHMP24386 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CHMP24386 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 LILRP1-201ENST00000444199 1370 ntBASIC13.95□□□□□ -0.18
CHMP24386 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHMP24386 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CHMP24386 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 CICP20-201ENST00000443330 2801 ntBASIC13.94□□□□□ -0.18
CHMP24386 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CHMP24386 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CHMP24386 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 NUS1P3-201ENST00000423502 862 ntBASIC13.94□□□□□ -0.18
CHMP24386 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.94□□□□□ -0.18
CHMP24386 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CHMP24386 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.94□□□□□ -0.18
CHMP24386 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.94□□□□□ -0.18
CHMP24386 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms