Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.62■□□□□ 0.25
ALDH1A1P00352 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ALDH1A1P00352 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AL662844.4-201ENST00000606367 2838 ntBASIC16.61■□□□□ 0.25
ALDH1A1P00352 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AC024909.3-201ENST00000611513 2257 ntBASIC16.61■□□□□ 0.25
ALDH1A1P00352 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 RN7SL564P-201ENST00000496309 250 ntBASIC16.61■□□□□ 0.25
ALDH1A1P00352 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 IGHEP1-201ENST00000521393 651 ntBASIC16.61■□□□□ 0.25
ALDH1A1P00352 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AL160191.2-201ENST00000603975 601 ntBASIC16.61■□□□□ 0.25
ALDH1A1P00352 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 AP000845.1-201ENST00000581677 2131 ntBASIC16.61■□□□□ 0.25
ALDH1A1P00352 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.61■□□□□ 0.25
ALDH1A1P00352 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ALDH1A1P00352 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 AL359091.4-201ENST00000610052 409 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 AC090386.2-201ENST00000623010 1039 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 AP000769.1-203ENST00000637245 208 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 BRD7P5-201ENST00000299197 1822 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 AC092135.3-201ENST00000624151 1846 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 WASH3P-207ENST00000560956 1394 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ALDH1A1P00352 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 AGGF1P1-201ENST00000509500 2073 ntBASIC16.6■□□□□ 0.25
ALDH1A1P00352 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
ALDH1A1P00352 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms