Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Gm3880A0A1B0GSB3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm35850-202ENSMUST00000211705 2120 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Mir7036b-201ENSMUST00000184791 63 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm29518-201ENSMUST00000190858 372 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm38297-201ENSMUST00000195122 1057 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 AC124569.2-201ENSMUST00000225998 818 ntBASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm26815-201ENSMUST00000181200 3366 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Gm3880A0A1B0GSB3 Gm44152-201ENSMUST00000205007 1691 ntBASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Gm3880A0A1B0GSB3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Gm3880A0A1B0GSB3 Gm18210-201ENSMUST00000209001 1524 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms