Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AC026740.1-201ENST00000607068 791 ntBASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AC100757.4-201ENST00000626934 759 ntBASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
ATP6V0A1Q93050 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ATP6V0A1Q93050 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 RN7SL720P-201ENST00000488178 304 ntBASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 MIR4783-201ENST00000580343 82 ntBASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 AC009955.4-201ENST00000597192 544 ntBASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 KRT8P19-201ENST00000551916 1455 ntBASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP6V0A1Q93050 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AL136379.1-201ENST00000623471 2642 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AC018442.1-201ENST00000421439 2061 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AC092135.3-201ENST00000624151 1846 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 E2F3P2-201ENST00000447755 1422 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AL136172.1-201ENST00000598590 1394 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 MRPL37P1-201ENST00000592451 1337 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 FAM58BP-201ENST00000439056 645 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 AC005324.6-201ENST00000587972 613 ntBASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP6V0A1Q93050 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms