Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.9■□□□□ 0.3
CNGA1P29973 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.9■□□□□ 0.3
CNGA1P29973 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.9■□□□□ 0.3
CNGA1P29973 AL132994.2-201ENST00000603120 687 ntBASIC16.9■□□□□ 0.3
CNGA1P29973 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.9■□□□□ 0.3
CNGA1P29973 AL805961.1-201ENST00000642026 753 ntBASIC16.9■□□□□ 0.3
CNGA1P29973 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.9■□□□□ 0.3
CNGA1P29973 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.9■□□□□ 0.3
CNGA1P29973 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CNGA1P29973 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
CNGA1P29973 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNGA1P29973 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.89■□□□□ 0.3
CNGA1P29973 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNGA1P29973 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.89■□□□□ 0.3
CNGA1P29973 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNGA1P29973 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNGA1P29973 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CNGA1P29973 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.89■□□□□ 0.29
CNGA1P29973 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CNGA1P29973 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CNGA1P29973 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 FAM58BP-201ENST00000439056 645 ntBASIC16.89■□□□□ 0.29
CNGA1P29973 AC114501.1-201ENST00000445949 172 ntBASIC16.89■□□□□ 0.29
CNGA1P29973 RN7SL8P-201ENST00000461771 266 ntBASIC16.89■□□□□ 0.29
CNGA1P29973 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CNGA1P29973 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 AC104640.1-201ENST00000562617 2109 ntBASIC16.89■□□□□ 0.29
CNGA1P29973 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.89■□□□□ 0.29
CNGA1P29973 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CNGA1P29973 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.89■□□□□ 0.29
CNGA1P29973 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CNGA1P29973 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 AC023024.2-201ENST00000623561 1993 ntBASIC16.89■□□□□ 0.29
CNGA1P29973 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.89■□□□□ 0.29
CNGA1P29973 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.89■□□□□ 0.29
CNGA1P29973 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.89■□□□□ 0.29
CNGA1P29973 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CNGA1P29973 AL137783.1-201ENST00000623494 1896 ntBASIC16.88■□□□□ 0.29
CNGA1P29973 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.88■□□□□ 0.29
CNGA1P29973 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 AC006486.2-201ENST00000624246 2199 ntBASIC16.88■□□□□ 0.29
CNGA1P29973 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CNGA1P29973 AL627231.1-201ENST00000394467 1125 ntBASIC16.88■□□□□ 0.29
CNGA1P29973 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
CNGA1P29973 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.88■□□□□ 0.29
CNGA1P29973 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.88■□□□□ 0.29
CNGA1P29973 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.88■□□□□ 0.29
CNGA1P29973 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CNGA1P29973 POU5F1P2-201ENST00000521750 823 ntBASIC16.88■□□□□ 0.29
CNGA1P29973 AC009779.1-201ENST00000551138 283 ntBASIC16.88■□□□□ 0.29
CNGA1P29973 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.88■□□□□ 0.29
CNGA1P29973 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms