Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 AC009955.4-201ENST00000597192 544 ntBASIC17.23■□□□□ 0.35
ERCC3P19447 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 AC100757.4-201ENST00000626934 759 ntBASIC17.23■□□□□ 0.35
ERCC3P19447 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ERCC3P19447 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC3P19447 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 REXO1L4P-201ENST00000605109 1937 ntBASIC17.23■□□□□ 0.35
ERCC3P19447 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC3P19447 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC3P19447 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ERCC3P19447 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.22■□□□□ 0.35
ERCC3P19447 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ERCC3P19447 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC3P19447 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC3P19447 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.22■□□□□ 0.35
ERCC3P19447 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC3P19447 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 AC134698.3-201ENST00000523880 214 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.22■□□□□ 0.35
ERCC3P19447 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.22■□□□□ 0.35
ERCC3P19447 AC100827.2-201ENST00000563214 1194 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 AC005324.6-201ENST00000587972 613 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.22■□□□□ 0.35
ERCC3P19447 AC138696.2-201ENST00000607376 223 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 AC068587.8-201ENST00000641239 219 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
ERCC3P19447 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.22■□□□□ 0.35
ERCC3P19447 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 AC020910.5-201ENST00000623668 1865 ntBASIC17.22■□□□□ 0.35
ERCC3P19447 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ERCC3P19447 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.22■□□□□ 0.35
ERCC3P19447 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC3P19447 FAM45BP-202ENST00000592932 1624 ntBASIC17.21■□□□□ 0.35
ERCC3P19447 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.21■□□□□ 0.35
ERCC3P19447 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ERCC3P19447 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ERCC3P19447 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.21■□□□□ 0.35
ERCC3P19447 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.21■□□□□ 0.35
ERCC3P19447 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ERCC3P19447 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.21■□□□□ 0.35
ERCC3P19447 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.21■□□□□ 0.35
ERCC3P19447 NUP210P1-202ENST00000504322 710 ntBASIC17.21■□□□□ 0.35
ERCC3P19447 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.21■□□□□ 0.35
ERCC3P19447 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.21■□□□□ 0.35
ERCC3P19447 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.21■□□□□ 0.35
ERCC3P19447 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ERCC3P19447 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.21■□□□□ 0.35
ERCC3P19447 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ERCC3P19447 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC3P19447 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
ERCC3P19447 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.21■□□□□ 0.35
ERCC3P19447 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ERCC3P19447 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms