Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.97□□□□□ -0.33
PHF1O43189 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.97□□□□□ -0.33
PHF1O43189 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PHF1O43189 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PHF1O43189 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.96□□□□□ -0.33
PHF1O43189 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.96□□□□□ -0.33
PHF1O43189 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
PHF1O43189 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.96□□□□□ -0.33
PHF1O43189 YBX1P6-201ENST00000442962 1002 ntBASIC12.96□□□□□ -0.33
PHF1O43189 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.96□□□□□ -0.33
PHF1O43189 IGHJ2P-201ENST00000454480 60 ntBASIC12.96□□□□□ -0.33
PHF1O43189 VDAC1P7-201ENST00000462417 847 ntBASIC12.96□□□□□ -0.33
PHF1O43189 KRT8P13-201ENST00000463294 1010 ntBASIC12.96□□□□□ -0.33
PHF1O43189 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.96□□□□□ -0.33
PHF1O43189 TDH-203ENST00000531764 1110 ntBASIC12.96□□□□□ -0.33
PHF1O43189 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.96□□□□□ -0.33
PHF1O43189 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.96□□□□□ -0.33
PHF1O43189 AL359711.2-201ENST00000563105 872 ntBASIC12.96□□□□□ -0.33
PHF1O43189 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.96□□□□□ -0.33
PHF1O43189 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.96□□□□□ -0.33
PHF1O43189 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
PHF1O43189 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.96□□□□□ -0.33
PHF1O43189 RPSAP52-203ENST00000622976 1023 ntBASIC12.96□□□□□ -0.33
PHF1O43189 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.96□□□□□ -0.33
PHF1O43189 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PHF1O43189 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.96□□□□□ -0.34
PHF1O43189 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
PHF1O43189 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.96□□□□□ -0.34
PHF1O43189 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
PHF1O43189 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.96□□□□□ -0.34
PHF1O43189 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PHF1O43189 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 WASH3P-207ENST00000560956 1394 ntBASIC12.95□□□□□ -0.34
PHF1O43189 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 AC134915.1-201ENST00000426461 574 ntBASIC12.95□□□□□ -0.34
PHF1O43189 AL442647.2-201ENST00000429864 857 ntBASIC12.95□□□□□ -0.34
PHF1O43189 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.95□□□□□ -0.34
PHF1O43189 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 AL162726.2-201ENST00000438986 1017 ntBASIC12.95□□□□□ -0.34
PHF1O43189 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 RPL7P3-201ENST00000441388 714 ntBASIC12.95□□□□□ -0.34
PHF1O43189 BCRP2-202ENST00000447763 634 ntBASIC12.95□□□□□ -0.34
PHF1O43189 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms