Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcgP82348 Gm9540-201ENSMUST00000188230 478 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Gm29499-201ENSMUST00000189151 486 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Gm28329-201ENSMUST00000191208 689 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Gm29171-201ENSMUST00000191397 486 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Gm6450-201ENSMUST00000200896 574 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Gm45113-201ENSMUST00000207518 165 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Gm8285-201ENSMUST00000208293 759 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.61□□□□□ -0.55
SgcgP82348 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcgP82348 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SgcgP82348 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcgP82348 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcgP82348 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcgP82348 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.61□□□□□ -0.55
SgcgP82348 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
SgcgP82348 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SgcgP82348 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcgP82348 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcgP82348 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Gm14441-201ENSMUST00000121960 540 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.6□□□□□ -0.55
SgcgP82348 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
SgcgP82348 Gm18367-201ENSMUST00000176139 600 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Gm27390-201ENSMUST00000184516 176 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm28937-201ENSMUST00000185413 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm29400-201ENSMUST00000187208 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm28662-201ENSMUST00000188446 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm28251-201ENSMUST00000188835 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm37318-201ENSMUST00000194325 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm38017-201ENSMUST00000194768 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm37287-201ENSMUST00000195449 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm37793-201ENSMUST00000195548 695 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Gm17831-201ENSMUST00000205579 900 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
SgcgP82348 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.6□□□□□ -0.55
SgcgP82348 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.6□□□□□ -0.55
SgcgP82348 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.6□□□□□ -0.55
SgcgP82348 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SgcgP82348 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SgcgP82348 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
SgcgP82348 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.6□□□□□ -0.55
SgcgP82348 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SgcgP82348 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.59□□□□□ -0.55
SgcgP82348 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
SgcgP82348 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
SgcgP82348 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SgcgP82348 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms