Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 AC079178.1-201ENST00000420915 656 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 HLA-K-203ENST00000430151 1046 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 RN7SL713P-201ENST00000582127 302 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 AL606495.2-201ENST00000605867 535 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 AL603764.1-201ENST00000636452 321 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 REXO1L2P-201ENST00000425429 2069 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 LILRP1-201ENST00000444199 1370 ntBASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AC244157.2-201ENST00000616239 1006 ntBASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AL139099.5-201ENST00000635274 300 ntBASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AC244452.3-201ENST00000636814 210 ntBASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.59□□□□□ -0.23
NPIPA3F8WFD2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA3F8WFD2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NPIPA3F8WFD2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms