Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 BANF1P1-201ENST00000553684 263 ntBASIC14.14□□□□□ -0.15
AP4S1Q9Y587 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
AP4S1Q9Y587 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 KRT8P12-202ENST00000472924 1397 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 SPDYE11-202ENST00000450699 704 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 KRT18P43-201ENST00000469825 1281 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 SLC25A39P2-201ENST00000537614 270 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 SPDYE9P-201ENST00000570642 692 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 MIR497HG-202ENST00000572453 3838 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 SPDYE10P-202ENST00000612005 668 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 SPDYE8P-202ENST00000612377 668 ntBASIC14.13□□□□□ -0.15
AP4S1Q9Y587 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP4S1Q9Y587 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP4S1Q9Y587 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms