Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CSH1-202ENST00000329882 1073 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 GAMTP2-201ENST00000430917 463 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 RPS5-205ENST00000598495 800 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL133467.4-201ENST00000602953 725 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL139220.1-201ENST00000436802 520 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 NDUFB2P1-201ENST00000506966 295 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 RNA5SP40-201ENST00000517147 110 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 EHF-205ENST00000527935 557 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC140658.2-201ENST00000566360 348 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC124254.1-201ENST00000583629 562 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC005580.1-201ENST00000592311 583 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL031430.1-201ENST00000642067 1039 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ZNRD1-202ENST00000359374 743 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC104212.2-201ENST00000478813 628 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AKR1B1P3-201ENST00000525311 588 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AL031058.1-201ENST00000561592 888 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MPHOSPH6-203ENST00000563504 617 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 MIR4327-201ENST00000581194 85 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 AC090409.1-202ENST00000586949 653 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 RN7SL238P-201ENST00000613832 290 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 RN7SL106P-201ENST00000618104 290 ntBASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNE2Q8WXH0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms