Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm8365-201ENSMUST00000197334 648 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Gm6450-201ENSMUST00000200896 574 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm8285-201ENSMUST00000208293 759 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.76□□□□□ -0.53
Nckap1P28660 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nckap1P28660 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nckap1P28660 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.76□□□□□ -0.53
Nckap1P28660 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nckap1P28660 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nckap1P28660 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.75□□□□□ -0.53
Nckap1P28660 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm12516-201ENSMUST00000120819 385 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.75□□□□□ -0.53
Nckap1P28660 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm6485-201ENSMUST00000160676 439 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm27910-201ENSMUST00000185004 107 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm9540-201ENSMUST00000188230 478 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm9645-201ENSMUST00000197131 792 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm43186-201ENSMUST00000198130 824 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm6867-201ENSMUST00000219165 425 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nckap1P28660 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.75□□□□□ -0.53
Nckap1P28660 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Nckap1P28660 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Nckap1P28660 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nckap1P28660 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nckap1P28660 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.74□□□□□ -0.53
Nckap1P28660 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Nckap1P28660 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nckap1P28660 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms