Protein–RNA interactions for Protein: F8VPU6

Usp9y, Ubiquitin-specific peptidase 9, Y chromosome, mousemouse

Predictions only

Length 2,556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9yF8VPU6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Ksr1-207ENSMUST00000226282 5260 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm14760-201ENSMUST00000121831 999 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm16228-201ENSMUST00000162286 809 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Cd9-ps-201ENSMUST00000174687 650 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm38233-201ENSMUST00000194259 807 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm38117-201ENSMUST00000194653 939 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm43966-201ENSMUST00000203301 612 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm45113-201ENSMUST00000207518 165 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm5040-201ENSMUST00000218609 800 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9yF8VPU6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm19863-201ENSMUST00000192480 2218 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm9095-201ENSMUST00000117607 881 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm9097-201ENSMUST00000120514 880 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm5706-201ENSMUST00000181525 993 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm8197-202ENSMUST00000193422 934 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm26313-201ENSMUST00000157770 308 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 AC154354.1-203ENSMUST00000225565 1364 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 AC022682.1-201ENSMUST00000224624 2023 ntBASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Usp9yF8VPU6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Usp9yF8VPU6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms