Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPENQ96T58 AC009102.2-201ENST00000606772 1639 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L2-201ENST00000561772 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L6-201ENST00000626483 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L1-201ENST00000627662 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L8-201ENST00000629013 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L3-201ENST00000630187 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L7-201ENST00000630678 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 DUX4L5-201ENST00000630834 1275 ntBASIC20.89■□□□□ 0.93
SPENQ96T58 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPENQ96T58 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPENQ96T58 AC099791.1-201ENST00000416440 715 ntBASIC20.88■□□□□ 0.93
SPENQ96T58 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.88■□□□□ 0.93
SPENQ96T58 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.88■□□□□ 0.93
SPENQ96T58 AC011298.3-201ENST00000615796 283 ntBASIC20.88■□□□□ 0.93
SPENQ96T58 AC136469.2-201ENST00000623944 1028 ntBASIC20.88■□□□□ 0.93
SPENQ96T58 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPENQ96T58 AC006455.2-201ENST00000429931 906 ntBASIC20.87■□□□□ 0.93
SPENQ96T58 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPENQ96T58 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPENQ96T58 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.87■□□□□ 0.93
SPENQ96T58 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPENQ96T58 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPENQ96T58 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SPENQ96T58 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.86■□□□□ 0.93
SPENQ96T58 MIR6722-201ENST00000617286 78 ntBASIC20.86■□□□□ 0.93
SPENQ96T58 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SPENQ96T58 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 SLC6A10P-202ENST00000431994 2058 ntBASIC20.86■□□□□ 0.93
SPENQ96T58 AC034268.1-201ENST00000441047 882 ntBASIC20.86■□□□□ 0.93
SPENQ96T58 SLC47A1P1-202ENST00000449666 945 ntBASIC20.86■□□□□ 0.93
SPENQ96T58 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.86■□□□□ 0.93
SPENQ96T58 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 DUX4L19-201ENST00000557448 1267 ntBASIC20.86■□□□□ 0.93
SPENQ96T58 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPENQ96T58 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPENQ96T58 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPENQ96T58 AL121749.1-202ENST00000609313 2153 ntBASIC20.85■□□□□ 0.93
SPENQ96T58 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPENQ96T58 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.85■□□□□ 0.93
SPENQ96T58 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.85■□□□□ 0.93
SPENQ96T58 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.85■□□□□ 0.93
SPENQ96T58 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPENQ96T58 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPENQ96T58 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPENQ96T58 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPENQ96T58 HLA-L-209ENST00000420110 1011 ntBASIC20.84■□□□□ 0.93
SPENQ96T58 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPENQ96T58 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.84■□□□□ 0.93
SPENQ96T58 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.84■□□□□ 0.93
SPENQ96T58 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SPENQ96T58 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SPENQ96T58 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
SPENQ96T58 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPENQ96T58 AC142086.6-201ENST00000621154 1765 ntBASIC20.83■□□□□ 0.93
SPENQ96T58 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPENQ96T58 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.83■□□□□ 0.93
SPENQ96T58 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPENQ96T58 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
SPENQ96T58 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SPENQ96T58 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
SPENQ96T58 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
SPENQ96T58 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SPENQ96T58 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.83■□□□□ 0.92
SPENQ96T58 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SPENQ96T58 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.82■□□□□ 0.92
SPENQ96T58 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPENQ96T58 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.82■□□□□ 0.92
SPENQ96T58 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SPENQ96T58 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.82■□□□□ 0.92
SPENQ96T58 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.82■□□□□ 0.92
SPENQ96T58 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.82■□□□□ 0.92
SPENQ96T58 AC135731.1-201ENST00000569415 2548 ntBASIC20.82■□□□□ 0.92
SPENQ96T58 ID1-201ENST00000376105 1233 ntBASIC20.82■□□□□ 0.92
SPENQ96T58 AC233992.3-201ENST00000607491 485 ntBASIC20.82■□□□□ 0.92
SPENQ96T58 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SPENQ96T58 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
SPENQ96T58 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPENQ96T58 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SPENQ96T58 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SPENQ96T58 TSPY26P-201ENST00000476365 1326 ntBASIC20.81■□□□□ 0.92
SPENQ96T58 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SPENQ96T58 AC027612.3-201ENST00000413684 1047 ntBASIC20.8■□□□□ 0.92
SPENQ96T58 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.8■□□□□ 0.92
SPENQ96T58 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.8■□□□□ 0.92
SPENQ96T58 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.8■□□□□ 0.92
SPENQ96T58 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.8■□□□□ 0.92
SPENQ96T58 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SPENQ96T58 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.79■□□□□ 0.92
SPENQ96T58 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SPENQ96T58 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.79■□□□□ 0.92
SPENQ96T58 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms