Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sgms1Q8VCQ6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sgms1Q8VCQ6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sgms1Q8VCQ6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Sgms1Q8VCQ6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sgms1Q8VCQ6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sgms1Q8VCQ6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Rps24-207ENSMUST00000224568 714 ntBASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sgms1Q8VCQ6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.15
Sgms1Q8VCQ6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Sgms1Q8VCQ6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgms1Q8VCQ6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgms1Q8VCQ6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sgms1Q8VCQ6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgms1Q8VCQ6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sgms1Q8VCQ6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sgms1Q8VCQ6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.24■■□□□ 1.15
Sgms1Q8VCQ6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sgms1Q8VCQ6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sgms1Q8VCQ6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sgms1Q8VCQ6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Sgms1Q8VCQ6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Gm45102-201ENSMUST00000207427 857 ntBASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sgms1Q8VCQ6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sgms1Q8VCQ6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Sgms1Q8VCQ6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sgms1Q8VCQ6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sgms1Q8VCQ6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Sgms1Q8VCQ6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sgms1Q8VCQ6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Gm40881-201ENSMUST00000223397 166 ntBASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sgms1Q8VCQ6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sgms1Q8VCQ6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sgms1Q8VCQ6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sgms1Q8VCQ6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.2■■□□□ 1.14
Sgms1Q8VCQ6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Gm14117-201ENSMUST00000122417 843 ntBASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Gm9959-201ENSMUST00000068277 390 ntBASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sgms1Q8VCQ6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sgms1Q8VCQ6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sgms1Q8VCQ6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Sgms1Q8VCQ6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sgms1Q8VCQ6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms