Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn1Q8K0T0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn1Q8K0T0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Rtn1Q8K0T0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.75■■□□□ 1.39
Rtn1Q8K0T0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn1Q8K0T0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn1Q8K0T0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn1Q8K0T0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rtn1Q8K0T0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.74■■□□□ 1.39
Rtn1Q8K0T0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rtn1Q8K0T0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rtn1Q8K0T0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rtn1Q8K0T0 Gm22238-201ENSMUST00000175222 88 ntBASIC23.73■■□□□ 1.39
Rtn1Q8K0T0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.73■■□□□ 1.39
Rtn1Q8K0T0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rtn1Q8K0T0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Rtn1Q8K0T0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn1Q8K0T0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn1Q8K0T0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.71■■□□□ 1.39
Rtn1Q8K0T0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn1Q8K0T0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rtn1Q8K0T0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rtn1Q8K0T0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
Rtn1Q8K0T0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rtn1Q8K0T0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rtn1Q8K0T0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rtn1Q8K0T0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.67■■□□□ 1.38
Rtn1Q8K0T0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rtn1Q8K0T0 Gm7143-201ENSMUST00000222811 859 ntBASIC23.67■■□□□ 1.38
Rtn1Q8K0T0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.66■■□□□ 1.38
Rtn1Q8K0T0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn1Q8K0T0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.66■■□□□ 1.38
Rtn1Q8K0T0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn1Q8K0T0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn1Q8K0T0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rtn1Q8K0T0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rtn1Q8K0T0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rtn1Q8K0T0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Rtn1Q8K0T0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Rtn1Q8K0T0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rtn1Q8K0T0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Rtn1Q8K0T0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms