Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1bQ8C7N7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1bQ8C7N7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1bQ8C7N7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Aph1bQ8C7N7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Aph1bQ8C7N7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.42■□□□□ 0.86
Aph1bQ8C7N7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Aph1bQ8C7N7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Aph1bQ8C7N7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Aph1bQ8C7N7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Aph1bQ8C7N7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1bQ8C7N7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1bQ8C7N7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1bQ8C7N7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1bQ8C7N7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Aph1bQ8C7N7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Aph1bQ8C7N7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Aph1bQ8C7N7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1bQ8C7N7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1bQ8C7N7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Aph1bQ8C7N7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Aph1bQ8C7N7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.36■□□□□ 0.85
Aph1bQ8C7N7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms