Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VPS13CQ709C8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.32■□□□□ 0.68
VPS13CQ709C8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS13CQ709C8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS13CQ709C8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS13CQ709C8 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS13CQ709C8 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS13CQ709C8 AC009102.2-201ENST00000606772 1639 ntBASIC19.31■□□□□ 0.68
VPS13CQ709C8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VPS13CQ709C8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.31■□□□□ 0.68
VPS13CQ709C8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS13CQ709C8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.31■□□□□ 0.68
VPS13CQ709C8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VPS13CQ709C8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.3■□□□□ 0.68
VPS13CQ709C8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS13CQ709C8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS13CQ709C8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.3■□□□□ 0.68
VPS13CQ709C8 AC136469.2-201ENST00000623944 1028 ntBASIC19.3■□□□□ 0.68
VPS13CQ709C8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS13CQ709C8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VPS13CQ709C8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VPS13CQ709C8 TSPY26P-201ENST00000476365 1326 ntBASIC19.3■□□□□ 0.68
VPS13CQ709C8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VPS13CQ709C8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.3■□□□□ 0.68
VPS13CQ709C8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS13CQ709C8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS13CQ709C8 AC004911.1-201ENST00000416316 871 ntBASIC19.29■□□□□ 0.68
VPS13CQ709C8 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS13CQ709C8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS13CQ709C8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS13CQ709C8 MIR6722-201ENST00000617286 78 ntBASIC19.29■□□□□ 0.68
VPS13CQ709C8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.29■□□□□ 0.68
VPS13CQ709C8 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS13CQ709C8 AC027612.3-201ENST00000413684 1047 ntBASIC19.29■□□□□ 0.68
VPS13CQ709C8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS13CQ709C8 AL137784.2-201ENST00000607332 1000 ntBASIC19.29■□□□□ 0.68
VPS13CQ709C8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS13CQ709C8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.29■□□□□ 0.68
VPS13CQ709C8 AC005703.6-201ENST00000623265 1329 ntBASIC19.28■□□□□ 0.68
VPS13CQ709C8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS13CQ709C8 AC008764.7-201ENST00000593779 1081 ntBASIC19.28■□□□□ 0.68
VPS13CQ709C8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VPS13CQ709C8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS13CQ709C8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VPS13CQ709C8 AC123595.1-201ENST00000440769 1046 ntBASIC19.28■□□□□ 0.68
VPS13CQ709C8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS13CQ709C8 AC097639.1-201ENST00000565519 1891 ntBASIC19.28■□□□□ 0.68
VPS13CQ709C8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VPS13CQ709C8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS13CQ709C8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS13CQ709C8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS13CQ709C8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS13CQ709C8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS13CQ709C8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS13CQ709C8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS13CQ709C8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS13CQ709C8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.27■□□□□ 0.68
VPS13CQ709C8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.27■□□□□ 0.67
VPS13CQ709C8 AL138724.1-201ENST00000606771 1088 ntBASIC19.27■□□□□ 0.67
VPS13CQ709C8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VPS13CQ709C8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS13CQ709C8 AC131274.2-201ENST00000580697 1507 ntBASIC19.26■□□□□ 0.67
VPS13CQ709C8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS13CQ709C8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS13CQ709C8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS13CQ709C8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS13CQ709C8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS13CQ709C8 AC006455.2-201ENST00000429931 906 ntBASIC19.26■□□□□ 0.67
VPS13CQ709C8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS13CQ709C8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS13CQ709C8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS13CQ709C8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.25■□□□□ 0.67
VPS13CQ709C8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS13CQ709C8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS13CQ709C8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS13CQ709C8 AC099791.2-201ENST00000605725 427 ntBASIC19.24■□□□□ 0.67
VPS13CQ709C8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS13CQ709C8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS13CQ709C8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VPS13CQ709C8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS13CQ709C8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS13CQ709C8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.24■□□□□ 0.67
VPS13CQ709C8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VPS13CQ709C8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS13CQ709C8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS13CQ709C8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
VPS13CQ709C8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS13CQ709C8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.23■□□□□ 0.67
VPS13CQ709C8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VPS13CQ709C8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VPS13CQ709C8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VPS13CQ709C8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VPS13CQ709C8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms