Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav7-2Q5R1I3 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav7-2Q5R1I3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav7-2Q5R1I3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav7-2Q5R1I3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trav7-2Q5R1I3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7-2Q5R1I3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7-2Q5R1I3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7-2Q5R1I3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav7-2Q5R1I3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms