Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssbp4Q3U4B1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssbp4Q3U4B1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssbp4Q3U4B1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssbp4Q3U4B1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
Ssbp4Q3U4B1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.27■□□□□ 0.36
Ssbp4Q3U4B1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssbp4Q3U4B1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssbp4Q3U4B1 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.27■□□□□ 0.36
Ssbp4Q3U4B1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssbp4Q3U4B1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Ssbp4Q3U4B1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.27■□□□□ 0.35
Ssbp4Q3U4B1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssbp4Q3U4B1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssbp4Q3U4B1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.26■□□□□ 0.35
Ssbp4Q3U4B1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssbp4Q3U4B1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssbp4Q3U4B1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ssbp4Q3U4B1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssbp4Q3U4B1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ssbp4Q3U4B1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.21■□□□□ 0.34
Ssbp4Q3U4B1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ssbp4Q3U4B1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Serp2-204ENSMUST00000228055 705 ntBASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ssbp4Q3U4B1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms