Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne2P59108 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cpne2P59108 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.16■□□□□ 0.34
Cpne2P59108 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Cpne2P59108 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.16■□□□□ 0.34
Cpne2P59108 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Gm11175-201ENSMUST00000116172 543 ntBASIC17.16■□□□□ 0.34
Cpne2P59108 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.16■□□□□ 0.34
Cpne2P59108 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne2P59108 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Gm27502-201ENSMUST00000183495 199 ntBASIC17.15■□□□□ 0.34
Cpne2P59108 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.15■□□□□ 0.34
Cpne2P59108 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne2P59108 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.14■□□□□ 0.33
Cpne2P59108 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpne2P59108 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne2P59108 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cpne2P59108 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne2P59108 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cpne2P59108 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne2P59108 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne2P59108 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.13■□□□□ 0.33
Cpne2P59108 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.13■□□□□ 0.33
Cpne2P59108 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne2P59108 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cpne2P59108 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.13■□□□□ 0.33
Cpne2P59108 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne2P59108 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne2P59108 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cpne2P59108 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cpne2P59108 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne2P59108 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne2P59108 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne2P59108 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpne2P59108 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne2P59108 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cpne2P59108 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cpne2P59108 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cpne2P59108 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.1■□□□□ 0.33
Cpne2P59108 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne2P59108 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne2P59108 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cpne2P59108 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne2P59108 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.09■□□□□ 0.33
Cpne2P59108 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne2P59108 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cpne2P59108 Gm14523-201ENSMUST00000117260 558 ntBASIC17.09■□□□□ 0.33
Cpne2P59108 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne2P59108 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne2P59108 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.09■□□□□ 0.33
Cpne2P59108 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne2P59108 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Cpne2P59108 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne2P59108 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cpne2P59108 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.08■□□□□ 0.32
Cpne2P59108 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.08■□□□□ 0.32
Cpne2P59108 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne2P59108 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne2P59108 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne2P59108 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne2P59108 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.07■□□□□ 0.32
Cpne2P59108 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cpne2P59108 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms