Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Atp6v1aP50516 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Gm26571-201ENSMUST00000181399 666 ntBASIC24.87■■□□□ 1.57
Atp6v1aP50516 Gm43060-201ENSMUST00000200621 289 ntBASIC24.87■■□□□ 1.57
Atp6v1aP50516 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Atp6v1aP50516 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Atp6v1aP50516 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1aP50516 Gm10493-201ENSMUST00000097270 612 ntBASIC24.86■■□□□ 1.57
Atp6v1aP50516 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1aP50516 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1aP50516 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1aP50516 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Atp6v1aP50516 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Atp6v1aP50516 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC24.85■■□□□ 1.57
Atp6v1aP50516 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
Atp6v1aP50516 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Atp6v1aP50516 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Atp6v1aP50516 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.84■■□□□ 1.57
Atp6v1aP50516 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.84■■□□□ 1.57
Atp6v1aP50516 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.84■■□□□ 1.57
Atp6v1aP50516 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
Atp6v1aP50516 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atp6v1aP50516 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Atp6v1aP50516 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atp6v1aP50516 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atp6v1aP50516 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Atp6v1aP50516 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Gm42569-201ENSMUST00000200539 472 ntBASIC24.82■■□□□ 1.56
Atp6v1aP50516 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Atp6v1aP50516 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atp6v1aP50516 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atp6v1aP50516 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Atp6v1aP50516 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Atp6v1aP50516 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.8■■□□□ 1.56
Atp6v1aP50516 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Gm40848-201ENSMUST00000221998 324 ntBASIC24.8■■□□□ 1.56
Atp6v1aP50516 Spcs1-207ENSMUST00000228767 1008 ntBASIC24.8■■□□□ 1.56
Atp6v1aP50516 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Atp6v1aP50516 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Atp6v1aP50516 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.79■■□□□ 1.56
Atp6v1aP50516 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Atp6v1aP50516 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Gm27405-201ENSMUST00000184201 112 ntBASIC24.78■■□□□ 1.56
Atp6v1aP50516 Gm42642-201ENSMUST00000200683 355 ntBASIC24.78■■□□□ 1.56
Atp6v1aP50516 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Atp6v1aP50516 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Atp6v1aP50516 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Atp6v1aP50516 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Atp6v1aP50516 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Atp6v1aP50516 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC24.77■■□□□ 1.56
Atp6v1aP50516 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Atp6v1aP50516 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Atp6v1aP50516 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Atp6v1aP50516 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.76■■□□□ 1.55
Atp6v1aP50516 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1aP50516 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Atp6v1aP50516 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.76■■□□□ 1.55
Atp6v1aP50516 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.76■■□□□ 1.55
Atp6v1aP50516 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.76■■□□□ 1.55
Atp6v1aP50516 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1aP50516 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.76■■□□□ 1.55
Atp6v1aP50516 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1aP50516 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1aP50516 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1aP50516 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Atp6v1aP50516 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC24.75■■□□□ 1.55
Atp6v1aP50516 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.75■■□□□ 1.55
Atp6v1aP50516 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Atp6v1aP50516 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.75■■□□□ 1.55
Atp6v1aP50516 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Atp6v1aP50516 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Atp6v1aP50516 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.74■■□□□ 1.55
Atp6v1aP50516 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Atp6v1aP50516 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms