Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.56■□□□□ 0.72
Hcn1O88704 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn1O88704 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.55■□□□□ 0.72
Hcn1O88704 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.55■□□□□ 0.72
Hcn1O88704 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.55■□□□□ 0.72
Hcn1O88704 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn1O88704 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn1O88704 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.54■□□□□ 0.72
Hcn1O88704 Rps24-207ENSMUST00000224568 714 ntBASIC19.54■□□□□ 0.72
Hcn1O88704 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn1O88704 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn1O88704 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn1O88704 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.54■□□□□ 0.72
Hcn1O88704 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn1O88704 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Hcn1O88704 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn1O88704 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hcn1O88704 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.52■□□□□ 0.72
Hcn1O88704 Gm9959-201ENSMUST00000068277 390 ntBASIC19.52■□□□□ 0.72
Hcn1O88704 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hcn1O88704 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.52■□□□□ 0.72
Hcn1O88704 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn1O88704 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hcn1O88704 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.51■□□□□ 0.71
Hcn1O88704 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.51■□□□□ 0.71
Hcn1O88704 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.51■□□□□ 0.71
Hcn1O88704 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hcn1O88704 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.51■□□□□ 0.71
Hcn1O88704 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hcn1O88704 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Hcn1O88704 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn1O88704 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.5■□□□□ 0.71
Hcn1O88704 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hcn1O88704 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.5■□□□□ 0.71
Hcn1O88704 Gm45102-201ENSMUST00000207427 857 ntBASIC19.5■□□□□ 0.71
Hcn1O88704 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.5■□□□□ 0.71
Hcn1O88704 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn1O88704 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn1O88704 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn1O88704 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn1O88704 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.49■□□□□ 0.71
Hcn1O88704 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.49■□□□□ 0.71
Hcn1O88704 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.49■□□□□ 0.71
Hcn1O88704 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn1O88704 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hcn1O88704 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn1O88704 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.48■□□□□ 0.71
Hcn1O88704 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn1O88704 Gm14117-201ENSMUST00000122417 843 ntBASIC19.48■□□□□ 0.71
Hcn1O88704 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.48■□□□□ 0.71
Hcn1O88704 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn1O88704 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.48■□□□□ 0.71
Hcn1O88704 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn1O88704 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn1O88704 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn1O88704 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn1O88704 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn1O88704 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn1O88704 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn1O88704 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.47■□□□□ 0.71
Hcn1O88704 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.47■□□□□ 0.71
Hcn1O88704 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn1O88704 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn1O88704 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Hcn1O88704 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms