Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sema3aO08665 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Sema3aO08665 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3aO08665 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3aO08665 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3aO08665 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3aO08665 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.79■□□□□ 0.92
Sema3aO08665 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Sema3aO08665 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3aO08665 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sema3aO08665 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Sema3aO08665 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3aO08665 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Sema3aO08665 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3aO08665 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3aO08665 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.78■□□□□ 0.92
Sema3aO08665 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3aO08665 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3aO08665 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sema3aO08665 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sema3aO08665 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sema3aO08665 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3aO08665 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Sema3aO08665 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3aO08665 Gm7143-201ENSMUST00000222811 859 ntBASIC20.76■□□□□ 0.91
Sema3aO08665 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3aO08665 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sema3aO08665 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
Sema3aO08665 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sema3aO08665 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3aO08665 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3aO08665 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3aO08665 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.74■□□□□ 0.91
Sema3aO08665 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.74■□□□□ 0.91
Sema3aO08665 Gm22238-201ENSMUST00000175222 88 ntBASIC20.74■□□□□ 0.91
Sema3aO08665 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3aO08665 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.74■□□□□ 0.91
Sema3aO08665 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3aO08665 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sema3aO08665 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sema3aO08665 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.73■□□□□ 0.91
Sema3aO08665 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sema3aO08665 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.73■□□□□ 0.91
Sema3aO08665 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sema3aO08665 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.72■□□□□ 0.91
Sema3aO08665 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.72■□□□□ 0.91
Sema3aO08665 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sema3aO08665 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sema3aO08665 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.72■□□□□ 0.91
Sema3aO08665 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sema3aO08665 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sema3aO08665 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sema3aO08665 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sema3aO08665 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.71■□□□□ 0.91
Sema3aO08665 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sema3aO08665 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sema3aO08665 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Sema3aO08665 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Sema3aO08665 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Sema3aO08665 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sema3aO08665 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.7■□□□□ 0.9
Sema3aO08665 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sema3aO08665 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Sema3aO08665 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sema3aO08665 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sema3aO08665 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sema3aO08665 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sema3aO08665 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sema3aO08665 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sema3aO08665 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.68■□□□□ 0.9
Sema3aO08665 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Sema3aO08665 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sema3aO08665 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sema3aO08665 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sema3aO08665 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sema3aO08665 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sema3aO08665 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sema3aO08665 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms